Journal Paper

1. "A novel framework for quantitative rhinoplasty evaluation by ResNet convolutional neural network"
   Ziba Bouchani, Reza Aghaizadeh Zoroofi, Mohammad Sadeghi
   Biomedical Engineering Advances, Vol. 7, 2024
2. "An Automatic Framework for Nasal Esthetic Assessment by ResNet Convolutional Neural Network"
   Maryam Ashoori, Reza Aghaizadeh Zoroofi, Mohammad Sadeghi
   Journal of Imaging Informatics in Medicine, Vol. 37, pp.455-470, 2024
3. "Thigh muscle segmentation using a hybrid FRFCM‐based multi‐atlas method and morphology‐based interpolation algorithm"
   Malihe Molaie, Reza Aghaizadeh Zoroofi
   IET Image Processing, Vol. 15, No 11, pp.2572-2579, 2021
4. "A Knowledge-Based Modality-Independent Technique for Concurrent Thigh Muscle Segmentation: Applicable to CT and MR Images"
   ملیحه مولایی, Reza Aghaizadeh Zoroofi
   JOURNAL OF DIGITAL IMAGING, Vol. 33, No 5, pp.1122-1135, 2020
5. "Automatic reduction of wireless capsule endoscopy reviewing time based on factorization analysis"
   Abbas Biniaz, Reza Aghaizadeh Zoroofi, Sohrabi Masud Reza
   Biomedical Signal Processing and Control, Vol. 59, No 101897, 2020
6. "Fully automatic estimation of pelvic sagittal inclination from anterior-posterior radiography image using deep learning framework"
   Ata Ollah Jodeiri Sheikhzadeh, Reza Aghaizadeh Zoroofi, Yuta Hiasa, Masaki Takao, Nobuhiku Sugano, Yoshinobu Sato, Yoshito Otake
   COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, Vol. 184, No 105282, 2020
7. "Integrated system for automatic detection of representative video frames in wireless capsule endoscopy using adaptive sliding window singular value decomposition"
   Abbas Biniaz, Fatemeh Abdolali, Reza Aghaizadeh Zoroofi
   IET Image Processing, Vol. 2019, No 1, pp.1-7, 2019
8. "Automatic Detection of Salient Video Frames from Wireless Capsule Endoscopy using Adaptive Singular Value Decomposition"
   Abbas Biniaz, [] [], Reza Aghaizadeh Zoroofi, Omid HajiMaghsoudi, Yoshinobu Sato
   Biomedical Engineering, Vol. 12, No 4, pp.1-14, 2019
9. "A novel image-based retrieval system for characterization of maxillofacial lesions in cone beam CT images"
   [] [], Reza Aghaizadeh Zoroofi, Yoshito Otake, Yoshinobu Sato
   International Journal of Computer Assisted Radiology and Surgery, Vol. 14, No 5, pp.785-796, 2019
10. "Automated classification of maxillofacial cysts in cone beam CT images using contourlet transformation and Spherical Harmonics"
    [] [], Reza Aghaizadeh Zoroofi, Yoshito Otake, Yoshinobu Sato
    COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, Vol. 139, No 2017, pp.197-207, 2017
11. "Automatic segmentation of mandibular canal in cone beam CT images using conditional statistical shape model and fast marching"
    [] [], Reza Aghaizadeh Zoroofi, Maryam Abdolali, Futoshi Yokota, Yoshito Otake, Yoshinobu Sato
    International Journal of Computer Assisted Radiology and Surgery, Vol. 12, No 4, pp.581-593, 2016
12. "Automatic segmentation of maxillofacial cysts in cone beam CT images"
    [] [], Reza Aghaizadeh Zoroofi, Yoshito Otake, Yoshinobu Sato
    COMPUTERS IN BIOLOGY AND MEDICINE, Vol. 72, No 2016, pp.108-119, 2016
13. "Shape-based acetabular cartilage segmentation: application to CT and MRI datasets"
    Pooneh Roshanitabrizi, Reza Aghaizadeh Zoroofi, Futoshi Yokota, Yoshinobu Sato, Takashi nishi
    International Journal of Computer Assisted Radiology and Surgery, Vol. 11, No 7, pp.1247-1265, 2015
14. "Acetabular cartilage segmentation in CT arthrography based on a bone-normalized probabilistic atlas"
    Pooneh Roshani Tabrizi, Reza Aghaizadeh Zoroofi, Futoshi Yokota, Satoru Tamura, Takashi Nishii, Yoshinobu Sato
    International Journal of Computer Assisted Radiology and Surgery, Vol. 1, pp.1-14, 2014
15. "Classification of Normal and Diseased Liver Shapes based on Spherical Harmonics Coefficients"
    فرشید باباپور, Reza Aghaizadeh Zoroofi, علی عباسپور تهرانی, Shahram Akhlaghpour, Yoshinobo Sato
    JOURNAL OF MEDICAL SYSTEMS, Vol. 38, No 5, pp.1-9, 2014
16. "4D statistical shape modeling of the left ventricle in cardiac MR images"
    Reza Aghaizadeh Zoroofi, Shahrooz Faghih Roohi
    International Journal of Computer Assisted Radiology and Surgery, Vol. 8, No 3, pp.335-351, 2012
17. "Tissue harmonic imaging based on the fourth harmonic: a simulation study"
    Reza Aghaizadeh Zoroofi, Ayoob Baniasadipour
    IMAGING SCIENCE JOURNAL, Vol. 60, No 4, pp.202-207, 2012
18. "AUTOMATIC FACIAL SKIN DETECTION USING GAUSSIAN MIXTURE MODEL UNDER VARYING ILLUMINATION"
    Reza Aghaizadeh Zoroofi, Md. Foisal Hossain, Mousa Shamsi, Mohammad Reza Alsharif, Katsumi Yamashita
    International Journal of Innovative Computing Information and Control, Vol. 8, No 2, 2012
19. "Toward a new wavelet-based watermarking approach for color images using bio-inspired optimization principles"
    Reza Aghaizadeh Zoroofi, Ehsan Vahedi, Mohsen Shiva
    DIGITAL SIGNAL PROCESSING, Vol. 22, No 1, pp.153-162, 2012
20. "A Hessian-based filter for vascular segmentation of noisy hepatic CT scans"
    Reza Aghaizadeh Zoroofi, Amir H Froozan, Yoshinobu Sato, Masatoshi Hori
    International Journal of Computer Assisted Radiology and Surgery, Vol. 7, No 2, pp.199-205, 2011
21. "Sequential Clustering-based Facial Feature Extraction Method for Automatic Creation of Facial Models from Orthogonal Views"
    Reza Aghaizadeh Zoroofi, Alireza Ghahari
    International Journal of Computer Science and Information Security, Vol. 6, No 2, pp.42-47, 2009
22. "A knowledge-based technique for liver segmentation in CT data"
    Reza Aghaizadeh Zoroofi, Amir H. Foruzan, Masatoshi Hori, Yoshinobu Sato
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, Vol. 33, No 8, pp.567-587, 2009
23. "A Knowledge Based Technique for Liver Segmentation in CT data"
    Amir Hossein Foruzan , Reza Aghaizadeh Zoroofi, Masatooshi Hori , Yoshinobo Sato
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, Vol. 33, No 8, pp.567-587, 2009
24. "Classification and numbering of teeth in multi-slice CT images using wavelet-Fourier descriptor"
    Mohammad Hosntalab , Reza Aghaizadeh Zoroofi, Ali Abbaspour Tehrani Fard , Gholamreza Shirani
    International Journal of Computer Applications in Engineering Sciences, Vol. 5, No 3, pp.237-249, 2009
25. "A Hybrid Segmentation Framework for Computer-Assisted Dental Procedures"
    Mohammad Hosntalab , Reza Aghaizadeh Zoroofi, Ali Abbaspour Tehrani Fard , Gholamreza Shirani , Mohammad Reza Asharif , Mohammad Hosntalab , Abbaspour Tehrani Fard Ali , Gholamreza Shirani , Mohammad Reza Asharif
    IEICE TRANSACTIONS ON INFORMATION AND SYSTEMS, Vol. E92-D, No 10, pp.2253-2263, 2009
26. "Segmentation of teeth in CT volumetric dataset by panoramic projection and variational level set"
    Mohammad Hosntalab , Reza Aghaizadeh Zoroofi, Ali Abbaspour Tehrani Fard , Gholamreza Shirani
    International Journal of Computer Applications in Engineering Sciences, Vol. 3, pp.257-265, 2008
27. "Liver segmentation by intensity analysis and anatomical information in multi - slice CT images"
    Foruzan Ah , Reza Aghaizadeh Zoroofi, Masatoshi Hori , Yoshinobu Sato
    International Journal of Computer Assisted Radiology and Surgery, Vol. 4, No 3, pp.287-297, 2006
28. "Wavelet Based Determination of Malignancy of the Pathological Images of the Prostate"
    Reza Farjam , Hamid Soltanian Zadeh , Reza Aghaizadeh Zoroofi
    WSEAS Transactions on Electronics, Vol. -, 2004
29. "Automated segmentation of necrotic femoral head from 3D MR data"
    Reza Aghaizadeh Zoroofi, Y Sato , T Nishii , N Sugano , H Yoshikawa , S Tamura
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, Vol. 28, No 5, pp.267-278, 2004
30. "Segmentation of Avascular Necrosis of the FEMORAL hEAD uSING 3 - D MR Images"
    Reza Aghaizadeh Zoroofi, T Nishii , Y Sato , N Sugano , H Yoshikawa , S Tamura
    COMPUTERIZED MEDICAL IMAGING AND GRAPHICS, Vol. 25, No 6, pp.511-521, 2001
31. "Automated inspection of ic wafer Contarmination"
    Reza Aghaizadeh Zoroofi, Hisashi Taketani , Shinichi Tamura , Yoshinobu Sato , Kazuma Sekiya
    PATTERN RECOGNITION, Vol. 34, No 6, pp.1307-1317, 2001
32. "Segmentation of pelvis and Femur from Computer Tomography images"
    Reza Aghaizadeh Zoroofi, T Sasama , N Sugano , T Nishii , Y Sato , K Yonenobu , H Yoshikawa , T Ochi
    The Institute of Elec info and Comm Eng IEICE Technical Report, Vol. 596, No 100, pp.99-104, 2001
33. "Restoration of two - type Degraded images by Markov Random Field - Maximum a posteriori Algorithm : Application to Single - Exposure X - ray imaging Grid - Less"
    Tanaka Hiroki , Yamaguchi Tetsuzo , Reza Aghaizadeh Zoroofi, Ogata Yuji , Sato Yoshinobu , Naito Hiroaki , Tamura Shin'ichi
    IEICE TRANSACTIONS ON ELECTRONICS, Vol. 83, No 2, pp.89-100, 2000
34. "Telemedicine for Evaluation of Brain Function by Metacomputer"
    Y Mizuno Matsumoto , S Date , Y Tabuchi , S Tamura , Y Sato , Reza Aghaizadeh Zoroofi, S Shimojo , Y Kadobayashi , H Tatsumi , H Nogawa , K Shinosaki , M Takeda , T Inouye , H Miyahara
    IEEE TRANSACTIONS ON INFORMATION TECHNOLOGY IN BIOMEDICINE, Vol. 4, No 2, pp.165-172, 2000
35. "Localization of Epileptic Foci in Landau - Kleffner Syndrome using MEG"
    Y Mizuno Matsumoto , T Inouye , S Tamura , Y Sato , Reza Aghaizadeh Zoroofi, T Yoshimine , A Kato , M Taniguchi , K J Lee , S T Ko , M Takeda , H Tatsumi , S Shimojo , H Miyahara
    Clinical Electroencephalography, Vol. 41, No 2, pp.123-127, 1999
36. "Reduction of MRI artifact due to 3 - D rigid motion"
    Reza Aghaizadeh Zoroofi, Y Sato , H Naito , S Tamura , S Shimojo , H Nakamura
    Medical Imaging and Information Sciences, Vol. 17, No 1, pp.69-79, 1999
37. "A New Anti - Scatter Method Using CR System"
    Y Ogata , Y Hashizume , K Inamoto , A Takigawa , Reza Aghaizadeh Zoroofi, Y Sato , S Tamura
    Journal of Japanese Association of Imaging, Vol. 61, No 4, pp.212-220, 1998
38. "Automatic Extraction and Measurement of Leukocyte Motion in Mictovessels Using Spatiotemporal image Analysis"
    Sato Y , Jian Chen , Reza Aghaizadeh Zoroofi, N Harada , S Tamura , T Shiga
    IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING, Vol. 44, No 4, pp.225-236, 1997
39. "Reduction of MRI Artifact Due to Planar Respiratory Motion"
    Reza Aghaizadeh Zoroofi
    Medical Imaging and Information Sciences, Vol. 15, No 1, pp.63-72, 1997
40. "MRI Artifact Cancellation Due to Rigid Motion in the Imaging plane"
    Reza Aghaizadeh Zoroofi, H Naito , S Tamura , Y Sato
    IEEE TRANSACTIONS ON MEDICAL IMAGING, Vol. 15, No 6, pp.768-784, 1996
41. "An improved Method for MRI Artifact Correction due to Translational Motion in the imaging Plane"
    Reza Aghaizadeh Zoroofi, Y Sato , S Tamura , H Naito , L Tang
    IEEE TRANSACTIONS ON MEDICAL IMAGING, Vol. 14, No 3, pp.471-479, 1995
42. "Automatic Musculoskeletal Segmentation in Medical Images"
    ملیحه مولایی, Eisa MohammadNejad, Reza Aghaizadeh Zoroofi
    Journal of Police Medicine, Vol. 10, No 3, 2021
43. "A comprehensive review of endoscopic image processing: methods, applications Clinical, advantages and disadvantages"
    Abbas Biniaz, Reza Aghaizadeh Zoroofi
    Journal of Machine Vision and Image Processing, Vol. هفتم, 2020
44. "روش ترکیبی بخشبندی سه بعدی روده بزرگ با استفاده از مدل های شکل پذیر هندسی بهبودیافته"
    سیده شهربانو فلاحیه حمید پور , علیرضا احمدیان , Reza Aghaizadeh Zoroofi, محمدعلی شعبانی صمغ آبادی
    مجله فیزیک پزشکی ایران, Vol. 4, No 1, pp.19-39, 2007
45. "بینایی استریو در جراحی سر و صورت"
    پریسا درویس زاده ورچه ای , Reza Aghaizadeh Zoroofi, Majid Nili Ahmad Abadi
    ماهنامه معارف, Vol. 6, No 62, pp.16-20, 2006
46. "3 - D quantification and visualization of vascular structures from confocal microscopic images using skeletonization and voxel - coding"
    H Soltanian Zadeh , A Shahrokni , Mm Khalighi , Zg Zhang , Reza Aghaizadeh Zoroofi, M Maddah , M Chopp
    COMPUTERS IN BIOLOGY AND MEDICINE, Vol. 35, No 9, pp.791-813, 2005
47. "بخش بندی بهینه و سریع کولون با استفاده از الگوریتم دو مرحله ای و استخراج ویژگیهای موضعی در تصاویر سی تی اسکن"
    جواد حسنی بیدگلی , علیرضا احمدیان , شهرام اخلاق پور , Reza Aghaizadeh Zoroofi
    مجله فیزیک پزشکی ایران, Vol. 2, No 9, pp.29-42, 2005
48. "ردیابی دقیق تومور در دوده بزرگ"
    شهروز فقیه روحی زاده , Reza Aghaizadeh Zoroofi, شهرام اخلاق پور , Hamid Soltanian Zadeh
    ماهنامه معارف, Vol. 5, No 53, 1732

Conference Paper

1. "Heightmap Reconstruction of Macula on Color Fundus Images Using Conditional Generative Adversarial Networks"
   Peyman Tahghighi, Reza Aghaizadeh Zoroofi, Sare Safi, Alireza Ramezani, Hamid Ahmadieh
   2021 26th International Computer Conference, Computer Society of Iran (CSICC), Tehran, Iran, 2021
2. "Automatic segmentation of tooth using deep convolutional neural network in cone-beam CT images"
   Omid Ghozatlou, Reza Aghaizadeh Zoroofi
   1st Scientific Resaerch Conference Mechanics, Electrical, Computer and Engineering Sciences, 2020
3. "Fully automated detection of the mandibular canal in cone beam CT images using Lie group based statistical shape models"
   [] [], Reza Aghaizadeh Zoroofi, Abbas Biniaz
   2018 25th national and 3rd International Iranian Conference on Biomedical Engineering (ICBME), 2018
4. "Fully automated segmentation of maxillofacial lesions based on 3D feature descriptors and symmetry analysis"
   [] [], Reza Aghaizadeh Zoroofi
   26th Iranian Conference on Electrical Engineering (ICEE2018), 2018
5. "Symmetry-based analysis of maxillofacial disorders in cone beam computed tomography"
   Meysam Hasani, Saeid Shakeri, [] [], Mostafa Jahanifar, Reza Aghaizadeh Zoroofi
   22nd Iranian Conference on Biomedical Engineering(ICBME 2015), 2015
6. "3D Segmentation and Volumetric of Growth Plate of Radius Bone for Legal Age Determination in MRI Data Set"
   [] [], Mansour Fatehi, Reza Aghaizadeh Zoroofi
   22nd Iranian Conference on Biomedical Engineering(ICBME 2015), 2015
7. "Content based image retrieval for maxillofacial lesions"
   Fatemeh Abdolali, mansor Fathi, Reza Aghaizadeh Zoroofi
   9th Iranian Conference of Machine Vision and Image Processing, 2015
8. "General multivariate linear modeling of mandible surface using SurfStat"
   Fatemeh Abdolali, Reza Aghaizadeh Zoroofi
   Iranian Conference on Bio medical Engineering, 2014
9. "Mandibular canal segmentation using 3D Active Appearance Models and shape context registration"
   Fatemeh Abdolali, Reza Aghaizadeh Zoroofi
   Iranian Conference on Bio medical Engineering, 2014
10. "3D Statistical Shape Models of Radius Bone for Segmentation in Multi Resolution MRI Data Sets"
    [] [], Mansour Fatehi, Mohsen Bahrami, Reza Aghaizadeh Zoroofi
    21st Iranian Conference on Biomedical Engineering (ICBME 2014), 2014
11. "On the Performance of Model-View-Controller-Based Privacy Preservation Architecture for Personal Health Record Systems."
    Negin Farhangi, Reza Aghaizadeh Zoroofi, Fattaneh Taghiyareh
    The Annual International Conference on Science and Engineering in Biology, Medical and Public Health, 2013
12. "A New Method for Automatic Border Detection in IVUS Images and 3D Visualization of the Segmented Frames"
    Zahra Najafi, آرش تاکی , ُSeyed Kamaledin Setarehdan, Reza Aghaizadeh Zoroofi, نصیر نواب
    First Iranian Conference on Fuzzy and Intelligent Systems, 2007
13. "A New Method for Automatic Border Detection of IVUS Images and characterization of Calcified Plaques"
    Zahra Najafi, آرش تاکی , ُSeyed Kamaledin Setarehdan, Reza Aghaizadeh Zoroofi, نصیر نواب
    Visual Information Engineering (VIE2007, 2007
14. "A New Automatic Border Detection Method for Lumen and Media-Adventitia boundaries in IVUS Images"
    Zahra Najafi, آرش تاکی , ُSeyed Kamaledin Setarehdan, Reza Aghaizadeh Zoroofi, نصیر نواب
    Computer Assisted Radiology and Surgery (CARS2007), 2007
15. "MRI-SPECT DATA FUSION FOR TEMPORAL LOBE EPILEPSY SURGERYCANDIDATE SELECTION"
    M. Ghannad-rezaie, Hamid Soltanian Zadeh, کورش جعفری, محمدرضا سیادت, Reza Aghaizadeh Zoroofi, Kost Elisevich
    17th IASTED, 2005
16. "MRI-SPECT data fusion for temporal lobe epilepsy surgery candidate selection"
    M. Ghannad-rezaie, Hamid Soltanian Zadeh, K Jafari-Khozani, MR Siadat, Reza Aghaizadeh Zoroofi, K.v. Elisevich
    SIP 2005, 2005
17. "Unsupervised Texture Segmentation Using Roughness in Wavelet Domain"
    R. Farjam, Reza Aghaizadeh Zoroofi, Hamid Soltanian Zadeh
    2nd IEEE-GCC, 2004
18. "MRSI Brain Tumor Characterization Using Wavelet and Wavelet Packets Feature Spaces and Artificial Neural Networks"
    Azadeh Yazdanshahmorad, Hamid Soltanian Zadeh, Reza Aghaizadeh Zoroofi
    26th Annual International Conference of the IEEE, 2004
19. "Multi-Resolution Automatic Segmentation of T1-Weighted Brain MR Images"
    M. Zeydabadinezhad, Reza Aghaizadeh Zoroofi, Hamid Soltanian Zadeh
    IEEE ISBI, 2004
20. "New methods of summarizing capsule endoscopy videos"
    محدثه امیریان, Reza Aghaizadeh Zoroofi
    The 3rd international conference of electrical engineering, computer, mechanics and new technology related to artificial intelligence, 2024
21. "Segmentation of Teeth Panoramic Images by a Deep learining approach"
    Milad Mohammadi, Reza Aghaizadeh Zoroofi
    The second conference on Computer Engineering, Electricity and Technology, 2024
22. "Automatic semantic segmentation based on Segunet architecture of MR images of the lumbar spine"
    Mohammad Ansarifard, Reza Aghaizadeh Zoroofi
    28th National Conference and 6th International Conference on Biomedical Engineering of Iran, 1400, 2021
23. "A new method to evaluate the nasal base view based on color coding"
    Maryam Ashoori, Reza Aghaizadeh Zoroofi, Mohmmad Sadeghi
    28th National Conference and 6th International Conference on Biomedical Engineering of Iran, 1400, 2021
24. "A Rapid Technique for 3D Visulazation of Medical Images"
    ملیحه مولایی, Reza Aghaizadeh Zoroofi
    Iranian Conference of Biomedical Engineering, 2019
25. "Concurrent and Anatomical Knowledge Based Segmentation of Thigh Muscles using Level Sets in CT Images"
    Malihe Molaie, Reza Aghaizadeh Zoroofi
    25th Iranian Conference of Biomedical Engineering, 2018
26. "Thigh Muscle Segmentation in CT Images"
    Behrang Fazli besheli, Reza Aghaizadeh Zoroofi
    25th Iranian Conference of Biomedical Engineering, 2018
27. "A Novel Technique Based on Cloud Picture Archiving and Communication for Trauma Application"
    Ashkan Keshavarzi, Reza Aghaizadeh Zoroofi, Ahmad Khonsari
    International Conference on Iran Information Technology, 2016
28. "Segmentation of Mandibular Channel using Fuzzy Contentedness in CBCT images"
    Saeid Shakeri, Meisam Hasani, [] [], Reza Aghaizadeh Zoroofi
    22nd Iranian Conference on Biomedical Engineering(ICBME 2015), 2016
29. "Vectorization of Line Segments Based on Path Segmentation for 2D Animation"
    Emad Khezri, Reza Aghaizadeh Zoroofi
    1st International Conference of Information Technology, 2015
30. "Cage Based data Simulation: Application in Statistical Shape Based Atlas"
    [] [], Reza Aghaizadeh Zoroofi
    Seventh National Iranian Conference of Electrical and Electronic Engineering, 2015
31. "shape based 3D modeling of CT images based on spherical harmonics"
    Fatemeh Abdolali, Reza Aghaizadeh Zoroofi
    19 Annual Conference of Computer Society of Iran, 2014